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A machine learning algorithm for high throughput identification of FTIR spectra: Application on microplastics collected in the Mediterranean Sea

Mikael Kedzierski , Mathilde Falcou-Préfol , Marie Emmanuelle Kerros , Maryvonne Henry , Maria Luiza Pedrotti , et al.
Chemosphere, 2019, 234, pp.242-251. ⟨10.1016/j.chemosphere.2019.05.113⟩
Journal articles hal-02407542v1
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Prey taxonomy rather than size determines salp diets

Ayelet Dadon-Pilosof , Fabien Lombard , Amatzia Genin , Kelly R Sutherland , Gitai Yahel
Limnology and Oceanography, 2019, 64 (5), pp.1996-2010. ⟨10.1002/lno.11165⟩
Journal articles hal-02302266v1
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The Seasonal and Inter-Annual Fluctuations of Plankton Abundance and Community Structure in a North Atlantic Marine Protected Area

Fabio Benedetti , Laëtitia Jalabert , Marc Sourisseau , Beatriz Becker , Caroline Cailliau , et al.
Frontiers in Marine Science, 2019, 6, pp.214. ⟨10.3389/fmars.2019.00214⟩
Journal articles hal-02125435v1
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Low-shot learning of plankton categories

Simon-Martin Schröder , Rainer Kiko , Jean-Olivier Irisson , Reinhard Koch
11269, 2019, 978-3-030-12939-2. ⟨10.1007/978-3-030-12939-2_27⟩
Proceedings hal-03390570v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

Luigi Caputi , Quentin Carradec , Damien Eveillard , Amos Kirilovsky , Eric Pelletier , et al.
Global Biogeochemical Cycles, 2019, 33 (3), pp.391-419. ⟨10.1029/2018GB006022⟩
Journal articles hal-02999805v1
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Global Trends in Marine Plankton Diversity across Kingdoms of Life

Federico Ibarbalz , Nicolas Henry , Manoela Brandão , Severine Martini , Greta Busseni , et al.
Cell, 2019, 179 (5), pp.1084-1097.e21. ⟨10.1016/j.cell.2019.10.008⟩
Journal articles hal-03094778v1
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Globally Consistent Quantitative Observations of Planktonic Ecosystems

Fabien Lombard , Emmanuel Boss , Anya M Waite , Meike Vogt , Julia Uitz , et al.
Frontiers in Marine Science, 2019, 6, pp.196. ⟨10.3389/fmars.2019.00196⟩
Journal articles hal-02325576v1
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Distribution and quantification of bioluminescence as an ecological trait in the deep sea benthos

Severine Martini , Linda Kuhnz , Jérôme Mallefet , Steven H D Haddock
Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-50961-z⟩
Journal articles hal-02344802v1
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Investigating Particle Size-Flux Relationships and the Biological Pump Across a Range of Plankton Ecosystem States From Coastal to Oligotrophic

Christian Fender , Thomas Kelly , Lionel Guidi , Mark D. Ohman , Matthew Smith , et al.
Frontiers in Marine Science, 2019, 6, ⟨10.3389/fmars.2019.00603⟩
Journal articles hal-02386832v1
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Climate change may have minor impact on zooplankton functional diversity in the Mediterranean Sea

Fabio Benedetti , Sakina-Dorothée Ayata , Jean-Olivier Irisson , Fanny Adloff , François Guilhaumon
Diversity and Distributions, 2019, Conservation Biogeography in a changing climate, 25 (4), pp.568-581. ⟨10.1111/ddi.12857⟩
Journal articles hal-02108192v1
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The Tara Pacific expedition-A pan-ecosystemic approach of the "-omics" complexity of coral reef holobionts across the Pacific Ocean

Serge Planes , Denis Allemand , Sylvain Agostini , Bernard Banaigs , Emilie Boissin , et al.
PLoS Biology, 2019, 17 (9), pp.e3000483. ⟨10.1371/journal.pbio.3000483⟩
Journal articles hal-02402685v1
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Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)

Gabriel Gorsky , Guillaume Bourdin , Fabien Lombard , Maria Luiza Pedrotti , Samuel Audrain , et al.
Frontiers in Marine Science, 2019, 6, pp.650. ⟨10.3389/fmars.2019.00750⟩
Journal articles hal-02407578v1
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Global biogeography of coral recruitment: tropical decline and subtropical increase

N. N. Price , S. Muko , L. Legendre , R. Steneck , M. J. H. Van Oppen , et al.
Marine Ecology Progress Series, 2019, 621, pp.1-17. ⟨10.3354/meps12980⟩
Journal articles hal-02303231v1
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Prediction of unprecedented biological shifts in the global ocean

G. Beaugrand , A. Conversi , A. Atkinson , J. Cloern , S. Chiba , et al.
Nature Climate Change, 2019, 9 (3), pp.237-243. ⟨10.1038/s41558-019-0420-1⟩
Journal articles hal-02189417v1
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Microplastics in Mediterranean Sea: A protocol to robustly assess contamination characteristics

Mikael Kedzierski , Jonathan Villain , Mathilde Falcou-Préfol , Marie Emmanuelle Kerros , Maryvonne Henry , et al.
PLoS ONE, 2019, 14 (2), pp.e0212088. ⟨10.1371/journal.pone.0212088⟩
Journal articles hal-02045882v1
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Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions

Marc Garel , Patricia Bonin , Severine Martini , Sophie Guasco , Marie Roumagnac , et al.
Frontiers in Microbiology, 2019, 10, pp.453. ⟨10.3389/fmicb.2019.00453⟩
Journal articles hal-02094373v1
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OB-GYN for salmon parrs

Jean-Olivier Irisson
Other publications hal-02611825v1
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Book of abstracts of the ARTIFACTZ Workshop Artificial intelligence for characterizing plankton traits from images

Frédéric Maps , Jean-Olivier Irisson , Sakina-Dorothée Ayata
Proceedings hal-02862387v1
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Eukaryotic and cyanobacterial communities associated with marine snow particles in the oligotrophic Sargasso Sea

Regitze B C Lundgreen , Cornelia Jaspers , Sachia J Traving , Daniel J Ayala , Fabien Lombard , et al.
Scientific Reports, 2019, 9, pp.8891. ⟨10.1038/s41598-019-45146-7⟩
Journal articles hal-02183469v1
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Mixotrophic protists display contrasted biogeographies in the global ocean

Emile Faure , Fabrice Not , Anne-Sophie Benoiston , Karine Labadie , Lucie Bittner , et al.
ISME Journal, 2019, 13 (4), pp.1072-1083. ⟨10.1038/s41396-018-0340-5⟩
Journal articles hal-02182433v1
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Functional trait-based approaches as a common framework for freshwater and marine ecologists

Severine Martini , Floriane Larras , Aurélien Boyé , Emile Faure , Nicole Aberle , et al.
11th Symposium for European Freshwater Sciences (SEFS), Jun 2019, Zagreb, Croatia
Conference poster hal-03232606v1
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On the Estimation of Zooplankton-Mediated Active Fluxes in Oxygen Minimum Zone Regions

Rainer Kiko , Helena Hauss
Frontiers in Marine Science, 2019, 6, pp.741. ⟨10.3389/fmars.2019.00741⟩
Journal articles hal-02430592v1
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Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Guillem Salazar , Lucas Paoli , Adriana A. Alberti , Jaime Huerta-Cepas , Hans-Joachim Ruscheweyh , et al.
Cell, 2019, 179 (5), pp.1068-1083.e21. ⟨10.1016/j.cell.2019.10.014⟩
Journal articles hal-02877702v2
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Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems

Antonietta Capotondi , Michael Jacox , Chris Bowler , Maria Kavanaugh , Patrick Lehodey , et al.
Frontiers in Marine Science, 2019, 6, pp.623. ⟨10.3389/fmars.2019.00623⟩
Journal articles hal-02316446v1